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Graphical representation of proteins as four-color maps and their numerical characterization (CROSBI ID 146255)

Prilog u časopisu | izvorni znanstveni rad | međunarodna recenzija

Randić, Milan ; Vukičević, Damir ; Pisanski, Tomaž ; Vikić-Topić, Dražen ; Plavšić, Dejan Graphical representation of proteins as four-color maps and their numerical characterization // Journal of molecular graphics & modelling, 27 (2009), 5; 637-641. doi: 10.1016/j.jmgm.2008.10.00

Podaci o odgovornosti

Randić, Milan ; Vukičević, Damir ; Pisanski, Tomaž ; Vikić-Topić, Dražen ; Plavšić, Dejan

engleski

Graphical representation of proteins as four-color maps and their numerical characterization

We put forward a novel compact 2-D graphical representation of proteins based on the concept of virtual genetic code and a four-color map. The novel graphical representation uniquely represents proteins and allows one to easily and quickly visually observe and inspect similarity/dissimilarity between them. It also leads to a novel protein descriptor, a 10-dimensional vector derived from a novel structure matrix S associated with the map. The introduced numerical characterization of proteins is not only useful for their comparative study, but also for cataloguing information on a single protein. The approach is illustrated with the A chain of human insulin and the A chain of human insulin analogue glargine.

proteins ; four-color map ; graphical representation

Rad je prezentiran na skupu XXIX European Congress on Molecular Spectroscopy (EUCMOS 2008), održanom od 31.08.-05.09.2008., Opatija, Hrvatska ; objavljen u Knjizi sažetaka /Musić, Svetozar ; Ristić, Mira ; Krehula Stjepko (ur.). - Zagreb : Školska knjiga , 2008. str. 84-84 ; ISBN 978-953-6690-76-3.

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Podaci o izdanju

27 (5)

2009.

637-641

objavljeno

1093-3263

10.1016/j.jmgm.2008.10.00

Povezanost rada

Matematika, Kemija

Poveznice
Indeksiranost