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Prediction of interacting protein residues using sequence and structure data. (CROSBI ID 45195)

Prilog u knjizi | izvorni znanstveni rad

Franke, Vedran ; Šikić, Mile ; Vlahoviček, Kristian Prediction of interacting protein residues using sequence and structure data. // Computational Drug Discovery and Design / Riccardo Baron (ur.). New York (NY) : Dordrecht : Heidelberg : London: Springer, 2012. str. 233-251

Podaci o odgovornosti

Franke, Vedran ; Šikić, Mile ; Vlahoviček, Kristian

engleski

Prediction of interacting protein residues using sequence and structure data.

Identifying hotspots responsible for protein interactions with other macromolecules or drugs provides insight info functional aspects of the protein network, and is a pivotal task in systems biology and drug discovery. Here we present the protocol for the application of a machine learning method – Random Forest – to prediction of interacting residues in proteins, based on either the structural parameters or the primary sequence alone.

Random Forest, protein interactions, prediction

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Podaci o prilogu

233-251.

objavljeno

Podaci o knjizi

Computational Drug Discovery and Design

Riccardo Baron

New York (NY) : Dordrecht : Heidelberg : London: Springer

2012.

978-1-61779-464-3

Povezanost rada

Računarstvo, Biologija